Semester | Course Unit Code | Course Unit Title | T+P+L | Credit | Number of ECTS Credits |
7 | COMP463 | COMPUTATIONAL GENOMICS | 3+0+0 | 5 | 5 |
Language of Instruction
|
English
|
Level of Course Unit
|
Bachelor's Degree
|
Department / Program
|
COMPUTER ENGINEERING
|
Type of Program
|
Formal Education
|
Type of Course Unit
|
Elective
|
Course Delivery Method
|
Face To Face
|
Objectives of the Course
|
Learn different types and sources of big data (-omics data) available in molecular biology,
Learn the computational methodologies for the analysis of various biological high throughput datasets, massively parallel sequencing datasets,
Learn a set of algorithms that have important applications in computational genomics, but which have key applications in other fields as well.
Apply the concepts learned to a real problem and convert the molecular data into medical knowledge.
|
Course Content
|
Following the Human Genome Project, the recent revolution in genomic technologies has enabled the generation of massive amounts of “omics” data. The challenge in this new era is to develop computational methods for integrating different data types and extracting complex patterns accurately and efficiently from a large volume of data. This course will give an overview of the fundamental concepts, enabling technologies and algorithms in the field of Computational Genomics. The course helps students to understand basic concepts and machine learning based methods in related areas and will enhance the student’s ability in applying them to solve real-world problems. Newly emerging disciplines, i.e. patient stratification, precision medicine and pharmacogenomics will also be discussed in this course.
|
Course Methods and Techniques
|
|
Prerequisites and co-requisities
|
None
|
Course Coordinator
|
None
|
Name of Lecturers
|
Asist Prof.Dr. VEHBİ ÇAĞRI GÜNGÖR burcu.gungor@agu.edu.tr
|
Assistants
|
None
|
Work Placement(s)
|
No
|
Recommended or Required Reading
|
Planned Learning Activities and Teaching Methods
Activities are given in detail in the section of "Assessment Methods and Criteria" and "Workload Calculation"
Assessment Methods and Criteria
ECTS Allocated Based on Student Workload
Activities
|
Total Work Load
|
Yazılı Sınav
|
1
|
10
|
10
|
Ev Ödevi
|
1
|
5
|
5
|
Sunum
|
1
|
5
|
5
|
Proje
|
1
|
20
|
20
|
Kısa Sınav
|
1
|
1
|
1
|
Okuma
|
1
|
1
|
1
|
Yüz Yüze Ders
|
1
|
3
|
3
|
Final Sınavı
|
1
|
20
|
20
|
Total Work Load
| |
|
Number of ECTS Credits 2
65
|
Course Learning Outcomes: Upon the successful completion of this course, students will be able to:
Weekly Detailed Course Contents
Contribution of Learning Outcomes to Programme Outcomes
Contribution: 1: Very Slight 2:Slight 3:Moderate 4:Significant 5:Very Significant
https://sis.agu.edu.tr/oibs/bologna/progCourseDetails.aspx?curCourse=74880&lang=en